Amir Madany Mamlouk, PD Dr. rer. nat.

@article{GrPaZiBaMa20,
title={A task-dependent active learning method for axon segmentation with CNNs},
author={Gr{\"u}ning, Philipp and Palumbo, Alex and Zille, Marietta and Barth, Erhardt and Mamlouk, Amir Madany},
journal={Proceedings on Automation in Medical Engineering},
volume={1},
number={1},
pages={025--025},
year={2020},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/GrPaZiBaMa20.pdf}
}

@inproceedings{GrPaLaHeBrZiMa20,
  title={Robust and Markerfree in vitro Axon Segmentation with CNNs},
  author={Gr{\"u}ning, Philipp and Palumbo, Alex and Landt, Svenja Kim and Heckmann, Lara and Brackhagen, Leslie and Zille, Marietta and Mamlouk, Amir Madany},
  booktitle={International Conference on Wireless Mobile Communication and Healthcare},
  pages={274--284},
  year={2020},
  organization={Springer},
  url={https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/GrPaLaHeBrZiMa20.pdf}
}

@inproceedings{GrMa20,
  title={Deep {N}eural-{G}as {C}lustering for {I}nstance {S}egmentation across {I}maging {E}xperiments},
  author={Gr{\"u}ning, Philipp and Mamlouk, Amir Madany},
  booktitle={2020 International Joint Conference on Neural Networks (IJCNN)},
  pages={1--8},
  year={2020},
  organization={IEEE}
}

@article{PaGrLaHeBaPaFlIkPiScKrKoBoMaZi20,
  title={Entire{A}xon: {D}eep learning deciphers four distinct patterns of axonal degeneration},
  author={Alex Palumbo and Philipp Gruening and Svenja Kim Landt and Lara Eleen Heckmann and Luisa Bartram and Alessa Pabst and Charlotte Flory and Maulana Ikhsan and Soeren Pietsch and Reinhard Schulz and Christopher Kren and Norbert Koop and Johannes Boltze and Amir Madany Mamlouk and Marietta Zille},
  journal={BioRxiv},
  publisher={Cold Spring Harbor Laboratory},
  year={2020},
  url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/PaGrLaHeBaPaFlIkPiScKrKoBoMaZi20.pdf}
}

@article{ScFrMuMa2018,
  author = {Scheel, Norman and Franke, Eric and M{\"u}nte, Thomas F. and Madany Mamlouk, Amir},
  title = {{D}imensional {C}omplexity of the {R}esting {B}rain in {H}ealthy {A}ging, {U}sing a {N}ormalized MPSE},
  journal = {Frontiers in Human Neuroscience},
  volume = {12},
  year = {2018},
  pages = {451},
  doi = {10.3389/fnhum.2018.00451},
  url = {https://doi.org/10.3389/fnhum.2018.00451}
}   

@article{LuKeBoAuMaHe2018,
  author = {Lucas, Christian and Kemmling, Andr{\'{e}} and Bouteldja, Nassim and Aulmann, Linda F. and Madany Mamlouk, Amir and Heinrich, Mattias P.},
  title = {Learning to predict ischemic stroke growth on acute CT perfusion data by interpolating low-dimensional shape representations},
  journal = {Frontiers in Neurology},
  volume = 9,
  pages = {989},
  year = {2018},
  doi = {10.3389/fneur.2018.00989},
  url = {https://doi.org/10.3389/fneur.2018.00989}
}

@inproceedings{LuKeMaHe2018,
  author = {Lucas, Christian and Kemmling, Andr{\'{e}} Kemmling and Madany Mamlouk, Amir and Heinrich, Mattias P.},
  title     = {Multi-scale neural network for automatic segmentation of ischemic strokes on acute perfusion images},
  booktitle = {15th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2018, Washington, DC, USA, April 4-7, 2018},
  pages     = {1118--1121},
  year      = {2018},
  crossref  = {DBLP:conf/isbi/2018},
  doi       = {10.1109/ISBI.2018.8363767},
  url       = {https://doi.org/10.1109/ISBI.2018.8363767}
}

@article{GeMa2018,
  author = {Geyer, Regine and Madany Mamlouk, Amir},
  journal = {PeerJ},
  pages = {e4825},
  title = {On the efficiency of the genetic code after frameshift mutations},
  volume = 6,
  year = 2018,
  doi = {10.7717/peerj.4825},
  url = {https://doi.org/10.7717/peerj.4825}
}

@article{MaHaMa2017,
  author      = {Madany Mamlouk, Amir and Haker, Martin and Martinetz, Thomas},
  title       = {Perception Space Analysis: From color vision to odor perception},
  journal = {International Joint Conference on Neural Networks (IJCNN)},
   year   = {2017},
  pages = {689--696},
  doi = {10.1109/IJCNN.2017.7965919},
  url = {https://doi.org/10.1109/IJCNN.2017.7965919}
}

@article{ScEsMuHeKrMa2015,
  author = {Scheel, Norman and Essenwanger, Andrea and M{\"u}nte, Thomas F. and Heldmann, Marcus and Kr{\"a}mer, Ulrike and Madany Mamlouk, Amir},
  title = {On the Selection of Seeds for Resting-State fMRI-Based Prediction
of Individual Brain Maturity},
  journal = {Bildverarbeitung f{\"u}r die Medizin (BVM 2015), Informatik aktuell},
  pages = {371--376},
  year = {2015}
}   

@article{ScEsMuHeKrMa15,
author = {Norman Scheel and Andrea Esswanger and Thomas F. M{\"u}nte and Marcus Heldmann and Ulrike M. Kr{\"a}mer and Amir Madany Mamlouk},
title = {Selection of {S}eeds for {R}esting-{S}tate f{MRI}-{B}ased {P}rediction of {I}ndividual {B}rain {M}aturity},
journal = {Bildverarbeitung f{\"u}r die {M}edizin, Informatik aktuell},
pages = {371--376},
year = {2015}
}

@inproceedings{BeKaRaThScRoMa14,
author = {Tim Becker and Winnie Kanje and Daniel Rapoport and Konstantin Thierbach and Nico Scherf and Ingo Roeder and Amir Madany Mamlouk},
title = {{T}he {B}enchmark {D}ata {S}et {C}e{T}res.b-{M}i for in vitro {M}itosis {D}etection},
booktitle = {IEEE International Symposium on Biomedical Imaging (ISBI'14)},
pages = {469--472},
year = {2014}
}

@inproceedings{ScChMa14,
author = {Norman Scheel and Catie Chang and Amir Madany Mamlouk},
title = {{T}he importance of physiological noise regression in high temporal resolution f{MRI}},
booktitle = {Artificial Neural Networks - ICANN 2014},
pages = {540--547},
publisher = {Springer},
series = {Lecture Notes in Computer Science (LNCS) 8681:540--547},
year = {2014}
}

@article{ScChMa2014,
  author = {Scheel, Norman and Chang, Catie and Madany Mamlouk, Amir},
  title = {The importance of physiological noise regression in high temporal resolution fMRI},
  journal = {Artificial Neural Networks - ICANN 2014, LNCS},
  volume = {8681},
  pages = {540--547},
  year = {2014}
}   

@inproceedings{ScMaAnMa12,
author = {Henry Sch{\"u}tze and Thomas Martinetz and Silke Anders and Amir Madany Mamlouk},
title = {A {M}ultivariate {A}pproach to {E}stimate {C}omplexity of {F}{MRI} {T}ime {S}eries},
editor = {Alessandro E.P. Villa and W{\l}odzis{\l}aw Duch and P{\'{e}}ter {\'{E}}rdi and Francesco Masulli and G{\"u}nter Palm},
booktitle = {Artificial Neural Networks and Machine Learning - ICANN 2012, 22nd International Conference, Lausanne, Switzerland, September 11-14, 2012, Proceedings, Part II},
year = {2012},
pages = {540--547},
publisher = {Springer},
series = {Lecture Notes in Computer Science},
volume = {7553},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/ScMaAnMa12.pdf}
}

@inproceedings{BeRaMa12,
author = {Becker, Tim and Rapoport, Daniel and Madany Mamlouk, Amir},
title = {From timelapse-data to genealogic trees: Using different contrast mechanisms to improve cell tracking},
booktitle = {IEEE International Symposium on Biomedical Imaging (ISBI'12)},
pages = {386--389},
year = {2012}
}

@inproceedings{BeRaMa11,
author = {Becker, Tim and Rapoport, Daniel and Madany Mamlouk, Amir},
title = {Adaptive mitosis detection in large in vitro stem cell populations using timelapse microscopy},
booktitle = {Bildverarbeitung f{\"u}r die Medizin (BVM 2011)},
pages = {49--53},
year = {2011},
series = {Informatik aktuell}
}

@article{ZhMaMaChWaHi11,
author = {Jiajie Zhang and Amir Madany Mamlouk and Thomas Martinetz and Suhua Chang and Jing Wang and Rolf Hilgenfeld},
title = {{P}hylo{M}ap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza {A} virus genome},
journal = {BMC Bioinformatics},
year = {2011},
volume = {12},
pages = {248},
url = {http://www.ncbi.nlm.nih.gov/pubmed/21689434},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/ZhMaMaChWaHi11.pdf}
}

@article{RaBeMaScKr11,
author = {Rapoport, Daniel H. and Becker, Tim and Madany Mamlouk, Amir and Schicktanz, Simone and Kruse, Charli},
title = {A {N}ovel {V}alidation {A}lgorithm {A}llows for {A}utomated {C}ell {T}racking and the {E}xtraction of {B}iologically {M}eaningful {P}arameters},
journal = {PLoS ONE},
volume = {6},
number = {11},
pages = {e27315},
year = {2011},
doi = {doi:10.1371/journal.pone.0027315},
url = {https://doi.org/10.1371/journal.pone.0027315}
}

@inproceedings{BrErMa11,
author = {Ingrid Br{\ae}nne and Jeanette Erdmann and Amir Madany Mamlouk},
title = {{SNP}boost: {I}nteraction {A}nalysis and {R}isk {P}rediction on {GWA} {D}ata},
booktitle = {Artificial Neural Networks - ICANN 2011, 21th International Conference, Espoo, Finland, June 14-17th, 2011, Proceedings},
publisher = {Springer},
volume = {6792},
series = {Lecture Notes in Computer Science},
pages = {111--118},
year = {2011},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/BrErMa11.pdf}
}

@inproceedings{BrLaMa10,
author = {Ingrid Br{\ae}nne and Kai Labusch and Amir Madany Mamlouk},
title = {{S}parse {C}oding for {F}eature {S}election on {G}enome-wide {A}ssociation {D}ata},
booktitle = {Artificial Neural Networks - ICANN 2010, 20th International Conference, Thessaloniki,Greece, September 15-18, 2010, Proceedings},
publisher = {Springer},
volume = {6352},
series = {Lecture Notes in Computer Science},
pages = {337--346},
year = {2010},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/BrLaMa10.pdf}
}

@article{BrLaMaMa10,
author = {Ingrid Br{\ae}nne and Kai Labusch and Thomas Martinetz and Amir Madany Mamlouk},
title = {Interpretive {R}isk {A}ssessment on {GWA} {D}ata with {S}parse {L}inear {R}egression},
journal = {Machine Learning Reports},
pages = {61--68},
year = {2010},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/BrLaMaMa10.pdf}
}

@article{Mada09,
author = {Madany Mamlouk, Amir},
title = {Computergest{\"u}tzte {A}nalyse von biologischen {W}ahrnehmungsprozessen},
journal = {GI-Edition - Lecture Notes in Informatics (LNI)},
pages = {171--180},
year = {2009},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/Mada09.pdf}
}

@inproceedings{KlMaMa08,
author = {Klement, Sascha and Madany Mamlouk, Amir and Martinetz, Thomas},
title = {{R}eliability of {C}ross-{V}alidation for {SVM}s in {H}igh-{D}imensional, {L}ow {S}ample {S}ize {S}cenarios},
pages = {41--50},
editor = {Vera Kurkov{\'a} and Roman Neruda and Jan Koutn\'{\i}k},
booktitle = {Artificial Neural Networks - ICANN 2008, 18th International Conference, Prague, Czech Republic, September 3-6, 2008, Proceedings, Part II},
publisher = {Springer},
series = {Lecture Notes in Computer Science},
volume = {5163},
year = {2008},
note = {http://www.springerlink.com/content/a852001534335865/},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/KlMaMa08.pdf}
}

@article{MaMaMo06,
author = {Martinetz, T. and Madany Mamlouk, A. and Mota, C.},
title = {Fast and {E}asy {C}omputation of {A}pproximate {S}mallest {E}nclosing {B}alls},
journal = {Proc. SIBGRAPI},
pages = {163--170},
year = {2006},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/MaMaMo06.pdf}
}

@article{MaShMeHoMa05,
author = {Madany Mamlouk, A. and Sharp, H. and Menne, K. M. L. and Hofmann, U. G. and Martinetz, T.},
title = {Unsupervised {S}pike {S}orting with {ICA} and its {E}valuation using {GENESIS} {S}imulations},
journal = {Neurocomputing},
volume = {65--66},
pages = {275--282},
year = {2005},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/MaShMeHoMa05.pdf}
}

@techreport{MaMa04a,
author = {Martinetz, T. and Madany Mamlouk, A.},
title = {Easy and {F}ast {C}omputation of {A}pproximate {S}mallest {E}nclosing {B}alls},
institution = {University of L{\"u}beck},
type = {Technical Report},
number = {SIIM-TR-A-04-13},
year = {2004},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/MaMa04a.pdf}
}

@article{MaMa04,
author = {Madany Mamlouk, A. and Martinetz, T.},
title = {On the {D}imensions of the {O}lfactory {P}erception {S}pace},
journal = {Neurocomputing},
volume = {58--60},
pages = {1019--1025},
year = {2004},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/MaMa04.pdf}
}

@inproceedings{MaKiBaBrMa03,
author = {Madany Mamlouk, A. and Kim, J. T. and Barth, E. and Brauckmann, M. and Martinetz, T.},
year = {2003},
title = {{O}ne-{C}lass {C}lassification with {S}ubgaussians},
editor = {B. Michaelis and G. Krell},
booktitle = {Pattern Recognition (DAGM 2003)},
volume = {2781},
series = {LNCS},
pages = {346--353},
publisher = {Springer-Verlag Berlin Heidelberg},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/MaKiBaBrMa03.pdf}
}

@article{MaChHoBo03,
author = {Madany Mamlouk, A. and Chee-Ruiter, C. and Hofmann, U. G. and Bower, J. M.},
title = {Quantifying olfactory perception: mapping olfactory perception space by using multidimensional scaling and self-organizing maps},
journal = {Neurocomputing},
volume = {52--54},
pages = {591--597},
year = {2003},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/MaChHoBo03.pdf}
}

@mastersthesis{Mada02,
author = {Madany Mamlouk, A.},
title = {Quantifying {O}lfactory {P}erception},
year = {2002},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/Mada02.pdf},
type = {Diploma Thesis},
school = {Universit{\"a}t zu L{\"u}beck}
}

@inproceedings{WaMa00,
author = {Walthelm, A. and Madany Mamlouk, A.},
title = {Multisensoric {A}ctive {S}patial {E}nvironment {E}xploration and {M}odeling},
booktitle = {Dynamische Perzeption, Workshop der GI-Fachgruppe 1.0.4 Bildverstehen, Ulm, November 2000},
publisher = {AKA Akademische Verlagsgesellschaft},
address = {Berlin},
pages = {141--146},
year = {2000}
}

@inproceedings{WaKlMa99,
author = {Walthelm, A. and Kluthe, R. and Madany Mamlouk, A.},
title = {Ein {3D}-{W}eltmodell zur teilaktiven {P}ositionsverfolgung in komplexen dynamischen {U}mgebungen},
booktitle = {15. Fachgespr{\"a}ch Autonome Mobile Systeme (AMS'99), M{\"u}nchen, November 26-27, 1999},
year = {1999}
}