Dr. Steffen Möller

@article{KaChMaMoSuSrGa11,
author = {Krishna Kumar Kandaswamy and Kuo-Chen Chou and Thomas Martinetz and Steffen M{\"o}ller and P. N. Suganthan and S. Sridharan and Ganesan Pugalenthi},
title = {{AFP}-{P}red: {A} random forest approach for predicting antifreeze proteins from sequence-derived properties},
journal = {Journal of Theoretical Biology},
volume = {270},
number = {1},
pages = {56--62},
year = {2011}
}

@article{KaPuMoHaKaSuMa10,
author = {Krishna Kumar Kandaswamy and Ganesan Pugalenthi and Steffen M{\"o}ller and Enno Hartmann and Kai-Uwe Kalies and P.N.Suganthan and Thomas Martinetz},
title = {Prediction of apoptosis protein locations with {G}enetic {A}lgorithms and {S}upport {V}ector {M}achines through a new mode of pseudo amino acid composition},
journal = {Protein Peptide Letters},
pages = {1473--1479},
volume = {17},
year = {2010}
}

@article{KaPuHaKaMoSuMa10,
author = {Krishna Kumar Kandaswamy and Ganesan Pugalenthi and Enno Hartmann and Kai-Uwe Kalies and Steffen M{\"o}ller and P.N. Suganthan and Thomas Martinetz},
title = {{SPRED}: {A} machine learning approach for the identification of classical and non-classical secretory proteins in mammalian genomes},
journal = {Biochemical and biophysical research communications},
volume = {391},
number = {3},
pages = {1306--1311},
year = {2010},
url = {https://www.inb.uni-luebeck.de/fileadmin/files/publications/inb-publications/pdfs/KaPuHaKaMoSuMa09.pdf}
}

@article{ZhKrNiDeMoMu09,
author = {X. Zhou and H. Krabbenh{\"o}ft and M. Niinim{\"a}ki and A. Depeuringe and S. M{\"o}ller and H. M{\"u}ller},
title = {An {E}asy {S}etup for {P}arallel {M}edical {I}mage {P}rocessing: {U}sing {T}averna and {ARC}},
journal = {Stud Health Technol Inform.},
year = {2009},
volume = {147},
pages = {41--50}
}

@article{ScHaErZiBaMo08,
author = {Daniel F. Schwarz and Oliver H{\"a}dicke and Jeanette Erdmann and Andreas Ziegler and Daniel Bayer and Steffen M{\"o}ller},
title = {{SNPtoGO}: characterizing {SNPs} by enriched {GO} terms},
journal = {Bioinformatics},
year = {2008},
volume = {24},
number = {1},
pages = {146--148},
url = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btm551v1}
}

@article{KrMoBa08,
author = {Hajo N. Krabbenh{\"o}ft and Steffen M{\"o}ller and Daniel Bayer},
title = {Integrating {ARC} {G}rid {M}iddleware with {T}averna {W}orkflows},
journal = {Bioinformatics},
volume = {24},
number = {9},
pages = {1221--1222},
year = {2008},
opt_pmid = 18353787
}

@article{MeArCaCoInDoLoMaMiMoScLu07,
author = {Emanuela Merelli and Giuliano Armano and Nicola Cannata and Flavio Corradini and Mark d'Inverno and Andreas Doms and Phillip Lord and Andrew Martin and Luciano Milanesi and Steffen M{\"o}ller and Michael Schroeder and Michael Luck},
title = {Agents in bioinformatics, computational and systems biology.},
journal = {Briefings in Bioinformatics},
volume = {8},
number = {1},
year = {2007},
pages = {45--59},
ee = {http://dx.doi.org/10.1093/bib/bbl014},
bibsource = {DBLP, http://dblp.uni-trier.de}
}

@inproceedings{EdVeGeMo07,
author = {Dirk Eddelbuettel and David Vernazobres and Albrecht Gebhardt and Steffen M{\"o}ller},
title = {apt-get install cran bioc: {O}n automated builds of 1700 {R} packages for {D}ebian},
booktitle = {use{R} conference},
address= {Ames, Iowa},
year = {2007},
url = {http://user2007.org/}
}

@inproceedings{BaBhOeOrWaKoMo07,
title={Dynamic Runtime Environments for Grid Computing},
author={D. Bayer and T. Bhimdi and G. Oechsler and F. Orellana and A. W{\"a}{\"a}n{\"a}nen and B. K{\'o}nya and S. M{\"o}ller},
address={Cracow, Poland},
booktitle={Cracow'07 Grid Workshop},
pages={155--162},
year={2007}
}

@inproceedings{MoBaVeGeEd07,
author = {Steffen M{\"o}ller and Daniel Bayer and David Vernazobres and Albrecht Gebhardt and Dirk Eddelbuettel},
title = {Scientific Grid Computing via Community-Controlled Autobuilding of Software Packages Across Architectures},
booktitle = {NETTAB},
address = {Pisa, Italy},
year = {2007},
url = {http://nettab.org/2007/}
}

@article{GoeSeMoeKoZe06,
author = {Robert Goertsches and Pablo Serrano-Fern{\'a}ndez and Steffen M{\"o}ller and Dirk Koczan and Uwe K. Zettl},
title = {Multiple {S}clerosis {T}herapy {M}onitoring {B}ased on {G}ene {E}xpression},
journal = {Curr. Pharm. Des.},
year = {2006},
volume = {12},
number = {29},
pages = {3761--3779},
url = {http://www.ingentaconnect.com/content/ben/cpd/2006/00000012/00000029/art00008}
}

@article{MoeZeGoeSe06,
author = {Steffen M{\"o}ller and Uwe K. Zettl and Robert Goertsches and Pablo Serrano-Fern{\'a}ndez},
title = {Comparative Genomics for the Investigation of Autoimmune Diseases},
journal = {Curr. Pharm. Des.},
year = {2006},
volume = {12},
number = {29},
pages = {3707--3722},
url = {http://www.ingentaconnect.com/content/ben/cpd/2006/00000012/00000029/art00003}
}

@article{YuBaWeKoMoThIb06,
author = {X. Yu and K. Bauer P. Wernhoff and D. Koczan and S. M{\"o}ller and H.-J. Thiesen and S.M. Ibrahim},
title = {Fine mapping of collagen-induced arthritis quantitative trait loci in an advanced intercross line},
journal = {J. Immunol.},
year = {2006},
volume = {177},
number = {10},
pages = {7042--7049}
}

@article{OecFeMoeIbOlJa06,
author = {Johan {\"O}ckinger and Pablo Serrano-Fern{\'a}ndez and Steffen M{\"o}ller and Saleh M. Ibrahim and Tomas Olsson and Maja Jagodic},
title = {Definition of a 1.06 Mb region linked to neuroinflammation in humans, rats and mice},
year = {2006},
journal = {Genetics},
volume = {173},
number = {3},
pages = {1539--1545},
url={http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=16624898}
}

@article{MoSeWaKoKoKu05,
author = {Steffen M{\"o}ller and Pablo Serrano-Fern{\'a}ndez and Michael Watson and Dirk Koczan and Vassilis Kotsikoris and Manfred Kunz and Martin Bl{\"u}ggel and Jens Pahnke and Harald Illges and Stefan Mikkat and Hans-J{\"u}rgen Thiesen and Michael O. Glocker and Uwe K. Zettl and Saleh M. Ibrahim},
title = {Collection of soluble variants of membrane proteins for transcriptomics and proteomics.},
journal = {In Silico Biol.},
volume = {5},
number = {3},
pages = {295--311},
year = {2005},
url= {http://www.bioinfo.de/isb/2005/05/0028/}
}

@article{AiCaArWiHaPaKoArThMoeKaGoRiThHaKo05,
author = {V. Aidinis and P. Carninci and M. Armaka and W. Witke and V. Harokopos and N. Pavelka and D. Koczan and C. Argyropoulos and M.M. Thwin and S. M{\"o}ller and W. Kazunori and P. Gopalakrishnakone and P. Ricciardi-Castagnoli and H.-J. Thiesen and Y. Hayashizaki and G. Kollias},
title = {Cytoskeletal rearrangements in synovial fibroblasts as a novel pathophysiological determinant of modeled rheumatoid arthritis.},
journal = {PLoS Genet.},
volume = {1},
number = {4},
pages = {e48},
year = {2005},
url = {http://www.pubmedcentral.gov/articlerender.fcgi?tool=pubmed&pubmedid=16254600}
}

@inproceedings{TiMo05,
author = {A. Tille and S. M{\"o}ller},
title = {Debian-{M}ed {F}ree {S}oftware in {H}ealth {C}are},
booktitle = {MAS*BIOMED Workshop, AAMAS, Utrecht, NL},
editor = {Guiliano Admano and J{\"o}rg Denzinger and Andrew Martin and Emanuela Merelli and Simon Miles and Huaglory Tianfield and Rainer Unland},
pages = {72--85},
year = {2005},
url = {http://people.debian.org/~tille/debian-med/talks/200507_biomed/index_en.html},
url = {http://www.diee.unica.it/biomed05/pdf/proceedings.pdf}
}

@misc{GiIbMiKoMo05,
author = {P. Gierer and S. M. Ibrahim and T. Mittlmeier and D. Koczan and S. M{\"o}ller and J. Landes and G. Gradl and B. Vollmar},
title = {Gene expression profile and synovial microcirculation at early stages of collagen-induced arthritis},
journal = {Arthritis Research and Therapy},
number = {7},
pages = {R868--R876},
year = {2005},
url = {http://arthritis-research.com/content/7/4/R868},
url = {http://arthritis-research.com/content/pdf/ar1754.pdf}
}

@article{JoOlLiMoKoWeThIbHo05,
author = {M. Johannesson and L. M. Olsson and A. K. Lindqvist and S. M{\"o}ller and D. Koczan and L. Wester-Rosenlof and H. J. Thiesenand S. Ibrahim and R. Holmdahl},
title = {Gene expression profiling of arthritis using a {QTL} chip reveals a complex gene regulation of the {Cia5} region in mice},
journal = {Genes Immun.},
volume = {6},
year = {2005},
pages= {575--583},
url = {http://www.nature.com/gene/journal/v6/n7/abs/6364242a.html}
}

@article{SeIbKoZeMo05,
author = {P. Serrano-Fern{\'a}ndez and S. M. Ibrahim and D. Koczan and U. K. Zettl and S. M{\"o}ller},
title = {In silico fine-mapping: narrowing disease-associated loci by intergenomics},
journal = {Bioinformatics},
volume = {21},
number = {8},
pages = {1737--1738},
year = {2005},
url = {http://bioinformatics.oxfordjournals.org/cgi/content/full/21/8/1737}
}

@techreport{BaMeMoe05,
author = {E. Bartocci and E. Merelli and S. M{\"o}ller},
title = {Integration of EnsEMBL with BioAgent.},
journal = {Technical Report},
number = {TR02-2005},
institution = {Dipartimento di Matematica e Informatica, Universita di Camerino},
year = {2005}
}